Recent publications with metAlign software:

• [1] V.V. Tolstikov, A. Lommen, K. Nakanishi, N. Tanaka, O. Fiehn, Anal. Chem. (2003) 75 6737-6740. Monolithic Silica-Based Capillary Reversed- Phase Liquid Chromatography/Electrospray Mass Spectrometry for Plant Metabolomics.
• [2] O. Vorst, C.H.R. de Vos, A. Lommen, R.V. Staps, R.G.F. Visser, R.J. Bino, R.D. Hall,
  Metabolomics 1 (2005) 169. A non-directed approach to the differential analysis of multiple LC MS-derived metabolic profiles
• [3] Y. Tikunov, A. Lommen, C.H.R. de Vos, H.A. Verhoeven, R.J. Bino, R.D. Hall, P. Lindhout, A.G. Bovy, Plant Physiol. Break Through Technologies Section 139 (2005) 1125-1137. A Novel Approach for Non-targeted Data Analysis for Metabolomics. Large-Scale Profiling of Tomato Fruit Volatiles.
• [[4] A.H.P. America, J.H.G. Cordewener, H.A. Van Geffen, A. Lommen, J.P.C. Vissers, R.J. Bino, R.D. Hall, Proteomics 6 (2006) 641-653. Alignment and statistical difference analysis of complex peptide data sets generated by multidimensional LC-MS
• [5] J.J.B. Keurentjes, F. Jingyuan, C.H.R. de Vos, A. Lommen, R. D. Hall, R. J. Bino, L. H. W. van der Plas, R. C. Jansen, D. Vreugdenhil, M. Koornneef, Nature Genetics (Technical Report) 38 (2006) 842-849. The genetics of plant metabolism.
• [6] A. Lommen, G. van der Weg, M. C. van Engelen, G. Bor, L.A.P. Hoogenboom, M.W.F. Nielen, Analytica Chimica Acta 584 (2007) 43–49. An untargeted metabolomics approach to contaminant analysis: Pinpointing potential unknown compounds
• [7] C.H.R. De Vos, S. Moco, A. Lommen, J.J.B. Keurentjes, R.J. Bino, R.D. Hall, Nature Protocols 2(4) (2007) 778. Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry.
• [8] A. Lommen, Anal. Chem. (2009) 2009 81(8):3079-86.  MetAlign: an interface-driven, versatile metabolomics tool for hyphenated full-scan MS data pre-processing.
• [9] Berendsen BJ, Essers ML, Mulder PP, van Bruchem GD, Lommen A, van Overbeek WM, Stolker LA. J Chromatogr A. 2009 Apr 9. [Epub ahead of print]. Newly identified degradation products of ceftiofur and cephapirin impact the analytical approach for quantitative analysis of kidney.
• [10] Jeroen C.W. Rijk, Arjen Lommen, Martien L. Essers, Maria J. Groot, Johan M. Van Hende, Timo G. Doeswijk and Michel W.F. Nielen,  Anal. Chem. (2009) Jul 20. [Epub ahead of print]. Metabolomics Approach to Anabolic Steroid Urine Profiling of Bovines Treated with Prohormones.